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PapayaNetBase: A Papaya Genomics Database

An agrigenomic platform to support research and breeding in papaya

  • Home
  • Browse Variety
  • Genome
    • C. papaya var. Eksotika
      • Search Transcripts
      • Search Protein Sequences
      • Search Gene Ontology
      • Downloads
    • C. papaya var. Sekaki
      • Search Transcripts
      • Search Proteins
      • Search Gene Ontology
      • Downloads
  • Pathway
    • Metabolites
  • Molecular Markers
    • Search SSRs
    • Search SNPs
    • Search InDELs
  • Disease
    • Resistance Genes
    • Effector Genes
  • Tools
    • PapayaNetBase: A knowledge graph for papaya traits
  • About Us
    • Tutorial

Resistance Genes

Home Resistance Genes
wdt_ID Transcript ID Position start P-value Motif 1 Motif 2 Motif 3 Family Swiss Prot ID Swiss Prot description Database
1 maker-scaffold_10007-snap-gene-0.22-mRNA-1 871 2.48E-13 GTSQCMSAIA GSYGYIAPEY AYTLKVDEKS LRR O65440 Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3; AltName: Full=Protein BARELY ANY MERISTEM 3; Flags: Precursor SwissProt
2 maker-scaffold_10007-snap-gene-0.22-mRNA-1 889 3.69E-13 EYAYTLKVDE KSDVYSFGVV LLELITGKRP LRR O65440 Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3; AltName: Full=Protein BARELY ANY MERISTEM 3; Flags: Precursor SwissProt
3 maker-scaffold_10045-snap-gene-0.30-mRNA-1 522 1.56E-12 EYTRTLMATP KGDVYSFGVV LLELVTGEKP LRR Q9ASS4 Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380; Flags: Precursor SwissProt
4 maker-scaffold_10059-snap-gene-0.29-mRNA-1 1.030 4.89E-13 SETHATTGVA GTFGYVAPEY AMTCRVSDKA LRR Q9S7I6 LRR receptor-like serine/threonine-protein kinase RPK2; AltName: Full=Protein TOADSTOOL 2; AltName: Full=Receptor-like protein kinase 2; Flags: Precursor SwissProt
5 maker-scaffold_10059-snap-gene-0.29-mRNA-1 1.048 1.99E-12 EYAMTCRVSD KADVYSYGVV LLELLSDKKA LRR Q9S7I6 LRR receptor-like serine/threonine-protein kinase RPK2; AltName: Full=Protein TOADSTOOL 2; AltName: Full=Receptor-like protein kinase 2; Flags: Precursor SwissProt
Transcript ID Family

About Us

PapayaNetBase is supported by the following sources: MARDI EPP14: Pembangunan Industri Benih (Development of Seed Industry) and 12th Malaysia Plan (RMKe-12)

Citation

If you use PapayaNetBase please cite: http://jtafs.mardi.gov.my/jtafs/44-2/SNP.pdf

Contact Us

PapayaNetBase team can be reached via this email: rabiatul@mardi.gov.my

Copyright 2020 PapayaNetBase. All Rights Reserved. Last Update 15 November 2024.

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